Change Log

v0.37 - Published 10/07/2021

Major changes - Added full functionality for torque analysis

v0.36 - Published 10/07/2021

Major changes - Maintenance update to calculate non-KMT ends type

v0.34.1 - Published 10/03/2021

Major changes - Maintenance update - Introduced desktop app for Win x64, Linux and mac with electron-packager

v0.34 - Published 01/03/2021

Major changes

  • Restructure MT interaction functions
    • Improved performance of the calculation
    • Added option to run the calculation as a function of distance
  • Added export of curvature data into Amira file
  • Added function to calculate SMTs minus-end distance
  • Restructured Analysis folder and split function for KMTs/SMTs and Stat
  • New tool to calculate position and interaction of KMT minus-ends with other MTs

Minor changes

  • Added Menger curvature
  • Error handler for analyzed data when uploaded
  • Added selection for local curvature by user
  • Added unified test protocol for all tools

Bug Fix

  • Bugfixes for Amira output

Other

  • Update library
  • small responsiveness improvement of the main page when user upload the wrong file
  • Added ASGA documentation
  • Added a script generating plots for eLife paper
  • Finished ASGA documentation

v0.33 - Published 28/12/2020

Major changes

  • New tool for MT interaction
  • Introduced new file format (.am) for readout and save analysis to read in Amira ZIB
  • Update R to 4.0.3 and packages

Minor changes

  • Change output in the End_morphology to show the name of the fiber not column no.

Bug Fix

  • Bugfix in the button reactivity, replaced all shinyAlert to sweetAlert
  • Bugfix in check_Data utility when displaying error type
  • Bugfix in fiber_area when using amira file
  • Bugfix for upload_data when using amira file
  • Bugfix for saving_amira and loading amira files
  • Bugfix with missing Amira variable shown in Test_Unit

Other

  • Added parallel processing library (parallel)
  • Created R Shiny template v1.0
  • Maintenance update and cleaned code
  • Remove deprecated as.tibble() from loading amira files

v0.32 - Published 30/08/2020

Major changes

  • Code reviewed and standardized according to the tidyverse guidelines
  • Added renv library management
  • Added custom test unit

Minor changes

  • Added node_id as an output of end_morpology

Bug Fix

  • Review entire code (v0.31.1)

Other

  • added ASGA logo

v0.31.1 - Published 17/07/2020

Major changes

  • Added Torque and helicity tools

Bug Fix

  • Fixed issue with end morphology
  • Hot Fixes in a pre analysis

v0.31 - Published 09/07/2020

Mejor changes

  • Added upload for the analyzed data for plotting
  • Added analysis report page and its responsiveness
  • Allows to change names and color of a graphs
  • Added tool for length and curvature of a fiber
  • Added tool for calculation of a kinetochore area and it's position

Minor changes

  • Changed style of the Download button

Bug Fix

  • Adjustment in a CSS style for different screen resolutions

Other

  • Created ASGA_dev for console based ASGA used for testing new tools
  • Change threshold for the ellipse model
  • Added plotting for the Ellipse, plus end and unified model

v0.30.1 - Published 24/05/2020

Major changes

  • Moved loading of a data from Upload to separate function
  • Upload and analysis of multiple data is now supported
  • Added module for saving data
  • Added module for exporting and downloading data

Minor changes

  • Title of an app is now a variable
  • Added small progress bar if more then one data set was upload to indicate which data set is currently analyzed

Bug Fix

  • Fixed analysis of the end morphology

Other

  • Started documentation of changes (a.k.a. Change Log)

v0.30 - Published 18/05/2020

Major changes

  • Added all tools from the local module
  • Cleaned CSS
  • Added fully functional button to the set-up settings